Synopsis
skill-organizer skill enable <source-path>
skill-organizer skill disable <source-path>
skill-organizer skill move-unmanaged
skill-organizer skill check-overlap
enable and disable
These commands resolve a source skill, rewrite the managed metadata in its SKILL.md, and run sync immediately afterward.
move-unmanaged
move-unmanaged discovers target entries that are not currently managed and offers to move them into the organized source tree.
check-overlap
check-overlap asks an installed supported agent CLI to review the current managed skills for overlap or duplication.
Typical examples:
skill-organizer skill check-overlap
skill-organizer skill check-overlap --choose-tool
skill-organizer skill check-overlap --tool claude
skill-organizer skill check-overlap --include-disabled
skill-organizer skill check-overlap --min-overlap-type partial
skill-organizer skill check-overlap --no-ask-to-apply
By default it analyzes enabled skills only, hides adjacent results unless requested, and asks whether to prepare a plan after the report.
If the selected tool supports verified interactive plan mode, the CLI can open that tool in plan mode.
If it does not, the CLI asks whether it should generate a remediation prompt, saves that prompt under plans/skill-overlap-fix-[YYYYDDMM]-[HHmmss].md, and prints the absolute path.
Flags
--yes Apply unmanaged moves without confirmation
--to Move a single unmanaged skill to a custom path relative to the source root
--include-disabled Include disabled skills when using check-overlap
--min-overlap-type adjacent|partial|duplicate or 1|2|3
--choose-tool Prompt to choose the agent tool again
--tool Use a specific installed tool id
--no-ask-to-apply Skip the follow-up plan prompt
--print-prompt Print the generated analysis prompt without invoking a tool